This application note describes a rapid method for detecting and quantifying mycotoxigenic fungi using the Stratagene Mx3000P QPCR system.
This document details the development and testing of a multiplex real-time PCR assay designed to detect and quantify three important genera of mycotoxigenic fungi: Aspergillus, Fusarium, and Penicillium. The assay utilizes genus-specific probes compatible with the Agilent Mx3000P QPCR System to identify these fungi in stored grain and other agricultural commodities rapidly.
The linear detection range of the multiplex assay is between 10 pg to 10 ng of DNA.
The optimum parameters are 10 pmol of each primer and 5 pmol of probe per reaction.
The annealing/extension temperature for the PCR assay is 70°C.