Agilent Genomic Workbench Lite Edition 6.5 SureSelect Quality Analyzer User Guide

This document is the user guide for Agilent Technologies Agilent Genomic Workbench Lite Edition 6.5 Sample Manager. It provides detailed information about the sample manager, including usage instructions and precautions.


Agilent Genomic Workbench Lite Edition 6.5 SureSelect Quality Analyzer User Guide - cover page
Brand
Agilent
Category
Other software
Document type
User Manual
Language
English
Pages
156
File format
PDF
File size
1.8 MB
Published
07 June, 2012
Updated
29 September, 2023
MD5 checksum
3E0EEF985B10938809BD1E8234B9F15B

About this manual

This document serves as a user guide for the SureSelect Quality Analyzer program, which is part of the Agilent Genomic Workbench Lite Edition software suite. It provides instructions on how to start the application, import sequence read files, and organize target genomic regions into analysis experiments.

The guide covers two primary modes of operation: interactive analysis and automated workflows. Users will learn how to display data in the Genomic Viewer, create various Quality Control (QC) reports including summary metrics and enrichment analyses, and set up sequential workflows to automatically produce QC reports.

What's inside

  • Getting Started
  • Using SureSelect Quality Analyzer Interactively
  • Setting Up and Running Workflows
  • SureSelect Quality Analyzer Reference
  • Importing Files
  • Creating Target Enrichment QC Reports
  • Genomic Viewer Overview

Frequently asked questions

How can users automatically produce QC reports?

Users can set up and run workflows that sequentially and automatically produce QC reports and enrichment analyses.

What is the SureSelect Quality Analyzer program used for?

It is part of the Agilent Genomic Workbench Lite Edition suite and is used to assess the quality of fragment pull-down for target enrichment experiments.

What types of QC reports can be created?

The program creates summary QC metrics, reports on read depth, and enrichment analysis results.

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