Agilent HD-CGH Custom Microarrays Product Note

Agilent oligo array-based Comparative Genomic Hybridization (aCGH) platform lets you profile DNA copy number variations with superior resolution, on a genome-wide scale and with high-throughput. It delivers unparalleled sensitivity and specificity that you can count on. Agilent High-Definition CGH (HD-CGH) microarrays allow you to create customized aCGH microarrays quickly and easily using an aCGH-optimized database of over 8 million probes. Perform selective and precise mapping of relevant regions-of-interest at the desired resolution, without compromising flexibility and convenience.


Agilent HD-CGH Custom Microarrays Product Note - cover page
Brand
Agilent
Document type
Product Leaflet
Language
English
Pages
4
File format
PDF
File size
120 KB
Published
03 July, 2012
Updated
30 September, 2023
MD5 checksum
CBCF13421EB3D6DCF793E55C2D137FAD

About this manual

The Agilent High-Definition CGH (HD-CGH) platform enables the creation of customized aCGH microarrays using an optimized database of over 8 million probes. This allows for selective and precise mapping of regions-of-interest at desired resolutions without compromising flexibility or convenience.

Designed with the SurePrint fabrication platform, these arrays offer high-resolution tiling in targeted areas and support total genomic DNA analysis without amplification. The system includes integrated informatics tools like GeneSpring CGH for visualization and quality control metrics to ensure reliable results.

What's inside

  • Features and Benefits
  • Optimized Probe Design and Selection
  • Microarrays per slide specifications
  • Probe Statistics (Human)
  • Probe Statistics (Mouse)
  • Ordering Information
  • Required Processing Components

Specifications

Probe length60-mer
Feature size (244K format)65 µm
Total features (Human, 244K)238,459
Median probe spacing (Human)196 bp
Minimum starting sample input0.2-0.5 µg genomic DNA

Frequently asked questions

What is the median probe spacing for human HD-CGH arrays?

The median probe spacing for the human library is approximately 196 bp.

Does the platform require DNA amplification?

No, it allows total genomic DNA analysis without amplification or complexity reduction.

Download PDF (120 KB)

More Agilent Manuals


View all Agilent manuals →