Agilent GeneSpring Workgroup 5.3 Web Application User Guide

Agilent GeneSpring Workgroup 5.3 Web Application User Guide is an user manual of Agilent GeneSpring Workgroup 5.3 Web Application, which is a gene expression data mining analysis software released by Agilent Technologies. The software is based on Web browser, and supports non-expert users to perform data mining and analysis on gene expression data, including differentially expressed gene filtering based on p-value and fold-change, principle component analysis, heatmap visualization and so on.


Agilent GeneSpring Workgroup 5.3 Web Application User Guide - cover page
Brand
Agilent
Document type
User Manual
Language
English
Pages
46
File format
PDF
File size
1.1 MB
Published
06 June, 2012
Updated
30 September, 2023
MD5 checksum
FDB2B4C579B4D9A3753046A18AC2334A

About this manual

The Agilent GeneSpring Workgroup 5.3 Web Application serves as an intuitive interface for non-expert users to access gene expression data stored in the GeneSpring Workgroup Server. It allows users to search, filter, and perform exploratory analysis on microarray profiles without needing direct server access.

Key features include applying multiple filter conditions to find differentially expressed genes based on p-value and fold-change, analyzing sample trends using Principal Component Analysis (PCA), determining differential expression groupings via heatmap visualization, and producing expression profiles for specific genes across samples.

What's inside

  • Getting Started
  • Setting up a client PC
  • Starting a Web Application Session
  • Analysis Workflow
  • Available Workflows
  • Sample Comparison (PCA)
  • Differential Expression with Heatmap
  • Searching and Inspecting Data

Specifications

Supported BrowsersFirefox 1.5, Internet Explorer 6.0 SP2 and greater
Required FeaturesActive scripting, Cookies

Frequently asked questions

What is the purpose of the GeneSpring Workgroup Web Application?

It provides an intuitive user interface to gene expression data stored within GeneSpring Workgroup Server for mining and analysis.

Can non-expert users use this application?

Yes, the application allows non-expert users to search, filter, and perform exploratory analysis on microarray profiles.

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