Agilent BioCel Fully Automated Genomics PCR Prep Technical Overview

This document mainly introduces the Agilent Genomics BioCel automated genomics system, which can automatically perform PCR preparation, unattended PCR and other tasks, thus improving the efficiency of genomic analysis.


Agilent BioCel Fully Automated Genomics PCR Prep Technical Overview - cover page
Brand
Agilent
Document type
Other
Language
English
Pages
8
File format
PDF
File size
450 KB
Published
05 July, 2012
Updated
30 September, 2023
MD5 checksum
EED407C42BE573C7FA684D1A62831D03

About this manual

This document provides a technical overview of the Agilent BioCel platform, an integrated preparative PCR system designed to create sequencer-ready sample plates from purified RNA or DNA with minimal user intervention. The system is capable of fully unattended operation for high-throughput genotyping applications.

The workflow utilizes single-step reverse transcription PCR and automated liquid handling to minimize plate processing times. Key features include spatial separation of liquid handling and thermal cycling, an enclosed clean environment, and quality assurance through barcode tracking. The platform is modular and customizable, supporting various configurations including optional thermal cycling cells and fluorescence/UV read-out capabilities.

What's inside

  • Introduction
  • Application fields of interest
  • Modular design and customization
  • Protocol overview
  • System layout components
  • Liquid handling operations
  • Thermal Cycling procedures
  • BioCel Environmental Control
  • Storage and incubation

Specifications

Throughput (Standard)20 samples per run with 192 clones amplified in 384-well plates in about 12 hours
Max Thermal CyclersUp to 18 thermal cyclers can be placed on the optional cell
RT-PCR Total Time~2.5 hours
Sequencing PCR Time~2.5 hours

Frequently asked questions

What is the primary function of the Agilent BioCel system?

It is an integrated preparative PCR system capable of making sequencer-ready sample plates from purified RNA or DNA with the absolute minimum of user intervention.

Which kits is the genotyping system described in this document designed around?

The system utilizes single step RT-PCR and is designed around the Agencourt AMPure and CleanSEQ kits.

How does the system maintain sample quality during processing?

The enclosed clean system maintains a constant environment for better consistency, and plates are sealed/unsealed on demand to keep samples and reagents as clean as possible.

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