Agilent ChIP-on-chip Genome-Wide Location Analysis Brochure

Agilent's ChIP-on-chip (chromatin immunoprecipitation-on-chip) is a powerful technology driving the next generation of microarray applications. This emerging platform goes beyond gene expression to explore gene regulation activity and allows determination of the precise location on the DNA sequence where a protein is bound. It pairs chromatin immunoprecipitation (ChIP) and Agilent's 60-mer DNA microarrays to provide comprehensive and genome-wide insight into transcriptional regulation and epigenomic events. ChIP-on-chip enhances the understanding of vital processes like cell proliferation, cell fate determination, oncogenesis, inflammation, apoptosis, and gene silencing. Transcription is a complex process that requires multiple interactions and orchestrated binding of numerous components. Thus, traditional gene expression analyses provide only partial glimpses into gene regulation, whereas ChIP-on-chip reveals a high-resolution map of transcriptional activities, including activation and repression. By partnering our unparalleled microarray expertise with exclusively patented technology from the Whitehead Institute, Agilent enables you to obtain insightful and robust profiles of DNA-protein binding and promoter occupancy across entire genomes.


Agilent ChIP-on-chip Genome-Wide Location Analysis Brochure - cover page
Brand
Agilent
Category
Other
Document type
Product Leaflet
Language
English
Pages
8
File format
PDF
File size
797 KB
Published
03 July, 2012
Updated
28 September, 2023
MD5 checksum
2AD421688BC070E7B81119D049D70845

About this manual

Agilent's ChIP-on-chip technology pairs chromatin immunoprecipitation with Agilent's 60-mer DNA microarrays to provide comprehensive and genome-wide insight into transcriptional regulation and epigenomic events. This platform allows for the determination of the precise location on the DNA sequence where a protein is bound, enhancing the understanding of vital processes like cell proliferation, oncogenesis, and gene silencing.

What's inside

  • Features and Benefits
  • ChIP-on-chip Process
  • Applications
  • Product Formats
  • Custom Microarrays
  • ChIP Analytics Software
  • High-Resolution Genome Maps

Specifications

Total number of features~244,000
Oligonucleotide probe length60-mer
Average probe spacing~100-300 bp
Overall assay time6 days from chromatin immunoprecipitation

Frequently asked questions

What is the primary purpose of Agilent ChIP-on-chip?

It is a powerful technology driving the next generation of microarray applications that goes beyond gene expression to explore gene regulation activity.

Which organisms are available for whole genome designs?

Available whole genome designs include human, mouse, Drosophila, C. elegans, and Arabidopsis.

What type of labeling system is used?

The system uses a two-color labeling system with Cy3 and Cy5 nucleotides.

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