Varia Workbench is a tool for analyzing genetic variation on a genomic scale. It can analyze tens or hundreds of thousands of genetic variations simultaneously. The program allows users to view and navigate through a visual representation of all measured variations in human chromosomes, perform genetic linkage and association tests to identify relationships between genotypes and phenotypes, view, calculate, and use haplotypes and haplotype maps, view and analyze pedigrees, and study the relationships between genetic variations, genes, and sequence regions.
This guide introduces the Varia Analysis Workbench for analyzing genetic variation on a genomic scale. It covers importing genotype data, filtering variations, and performing analyses like linkage, association, and haplotype studies. The guide also details new features in version A.02.00, including non-parametric linkage, ANOVA, regression, LOH, and quantitative case control. It provides step-by-step instructions for preparing data and setting up experiments.
Varia workbench provides tools for analyzing genetic variation on a genomic scale. The program can analyze tens or hundreds of thousands of genetic variations simultaneously.
New analyses include Non-parametric linkage (NPL), ANOVA, Regression, Loss of Heterozygosity (LOH), and Quantitative Case Control.
Select Import Data from the File menu, choose a text file, confirm the data file format and genome, and click Next.