ImageJ 1.45 User Guide

This document is the user guide for ImageJ 1.45, providing information on the installation, usage, and extension of the ImageJ image processing software.


ImageJ 1.45 User Guide - cover page
Brand
ImageJ
Document type
User Manual
Language
English
Pages
91
File format
PDF
File size
7.6 MB
Published
01 June, 2012
Updated
29 September, 2023
MD5 checksum
6B06A66533FF4118B0DA004C3DA973B8

About this manual

ImageJ is a public‑domain Java‑based image processing and analysis program that runs on Windows, macOS and Linux. This guide explains how to install, update, and operate ImageJ, as well as how to extend its functionality with macros, scripts, and plugins.

The manual covers getting started, keyboard shortcuts, menu commands, image handling (types, formats, stacks, hyperstacks), processing tools, analysis functions, plugin management, and where to find additional help and resources.

What's inside

  • Getting Started
  • Working with ImageJ
  • Extending ImageJ
  • ImageJ User Interface
  • Menu Commands
  • Image
  • Process
  • Analyze
  • Plugins
  • Keyboard Shortcuts

Specifications

Supported image bit depths8‑bit, 16‑bit, 32‑bit
Supported file formatsTIFF, GIF, JPEG, BMP, DICOM, FITS, raw
Operating systemsWindows, macOS, Linux

Frequently asked questions

How do I update ImageJ?

Run the Help → Update ImageJ… command, which installs the latest ij.jar in the ImageJ folder.

Where can I download ImageJ?

ImageJ can be downloaded from http://imagej.nih.gov/ij/download.html.

What image formats can ImageJ open?

ImageJ can read TIFF, GIF, JPEG, BMP, DICOM, FITS and raw files.

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